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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910658.1_cds_XP_016460677.1_54074
CDS Infomation

[gene=LOC107784121] [db_xref=GeneID:107784121] [protein=3-isopropylmalate dehydrogenase 2, chloroplastic-like] [protein_id=XP_016460677.1] [location=complement(join(103434..103508,104008..104160,104297..104350,104456..104563,104660..104776,105166..105252,105598..105686,105799..105874,108134..108245,108363..108492,109864..110080))] [gbkey=CDS]
Sequence

ATGGCGGCTTCGTTACAATTCACTGCAACTCCTCTCAACCAACTCCAATTTCATTCGAAA
ACTCTGCCCAAACACACCGCTAAATGGAGTACTATTCGCTGTTCCGCGGCCTCACCAACC
AAAAGCTACAACATCACTCTTCTCCCCGGCGATGGTATTGGACCTGAAGTTATTTCTGTT
GCCAAAAATGCCCTCCAACTCGTCGCTTCCCTTGAAGGATTTAATATTGGGTTCGAAGAG
ATGCATGTGGGAGGGGCTGCCTTGGATGCTGTTGGAGTGCCATTGCCTGATGAGACTCTC
AATTCTGCAAAGAAATCTGATGCTATTCTTCTTGGAGCAATTGGAGGGTATAAATGGGAC
AATAATGAAAGACATTTGAGGCCCGAGATGGCATTGCTTCACCTTCGAGGAGCCTTGAAG
GTGTTTGCTAACTTGAGACCAGCCACTGTTTTACCACAGTTAGTTGATGCTTCAACTTTG
AAGAAAGAAGTTGCTGAAGGTGTAGACCTGATGGTTGTTAGGGAACTTACAGGAGGTATT
TATTTTGGTGAACCAAGAGGTATCAAAACTAATGAAAATGGCCAGGAAATAGGTTTCAAC
ACTGAAGTGTATGCAGCATATGAGATCGAAAGAATTGCACGTATTGCATTTGAAACTGCA
AGGAAGCGTCGAGGAAAACTCTGTAGCGTGGATAAAGCAAATGTTTTGGAGGCCTCTACG
CTTTGGAGGAAGAAAGTTACAGCACTAGCCTCAGAGTATCCTGATGTAGAGCTCTCTCAC
ATGTATGTTGATAATGCAGCCATGCAACTTGTTCGCAACCCGAAGCAGTTTGATACAATT
TTGACAAACAACATATTTGGTGATATCCTGTCCGATGAAGCATCAATGATTACAGGAAGT
ATCGGGATGCTTCCTTCTGCCAGTCTTGGTGAAACGGGACCTGGATTATTTGAACCTATA
CATGGTTCTGCTCCTGATATTGCTGGGCAGGATAAAGCAAACCCCTTAGCTACAGTGCTC
AGTGCTGCTATGCTTTTGAAATATGGCCTAGGTGAGGAGAAGGCTGCTCAGAGAATTGAA
GCAGCTGTTTTGGACACCTTAAATCGAGGATTTCGTACCGGTGACATTCACTCTGCAGGA
CATAAATTGGTGGGGTGCAAGGAAATGGGTGAAGAAGTGCTCAAGTCTATTGACAGCAAA
ACTCCTGCTGCTGTTTAA

Peptide Sequence

PEP ID

XP_016460677.1
PEP Infomation

PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MAASLQFTATPLNQLQFHSKTLPKHTAKWSTIRCSAASPTKSYNITLLPGDGIGPEVISV
AKNALQLVASLEGFNIGFEEMHVGGAALDAVGVPLPDETLNSAKKSDAILLGAIGGYKWD
NNERHLRPEMALLHLRGALKVFANLRPATVLPQLVDASTLKKEVAEGVDLMVVRELTGGI
YFGEPRGIKTNENGQEIGFNTEVYAAYEIERIARIAFETARKRRGKLCSVDKANVLEAST
LWRKKVTALASEYPDVELSHMYVDNAAMQLVRNPKQFDTILTNNIFGDILSDEASMITGS
IGMLPSASLGETGPGLFEPIHGSAPDIAGQDKANPLATVLSAAMLLKYGLGEEKAAQRIE
AAVLDTLNRGFRTGDIHSAGHKLVGCKEMGEEVLKSIDSKTPAAV

Transcript Sequence

Gene sequence data has not been registered.